Read about some of the fascinating research funded by Genomics Aotearoa.
Waiwera estuary datasets reveals astonishing information on viruses
Research suggests that viruses can significantly manipulate microbial communities and biogeochemistry in the terrestrial subsurface. This new understanding at both the microbial and virus level enables a more comprehensive overview of the Waiwera Estuary composition and function.
Kākāpō recovery – new information on growth, fertility, embryo survival and clutch size critical to species survival
As genomics technology has continued to advance, so too has our ability to map and understand key kākāpō survival traits.
Engaging with end-users of Invasomics helps to prevent a stinky problem
New Zealand’s borders are highly vulnerable to the continuous threat of new pests and diseases with the potential to cause immense environmental and agricultural damage - the stinky bug being one such threat.
Gillenia – a Rosetta stone for Rosaceae
Genomics Aotearoa-funded researchers have produced a new high quality genome assembly on Gillenia, a perennial shrub related to edible fruits, which has enormous potential for further developments for our tree crop production.
A sheep pangenome for the benefit of primary production
In Aotearoa you don’t have to be a farmer to know that not all sheep breeds are the same. The sheep pangenome project (officially the Ovine Pangenome project) aims to deliver high-quality genomes for 16 sheep breeds, chosen for their divergent and important traits.
Working with communities to gain insight into Group A Streptococcus
Many bacteria that are a concern for public health vary in their symptoms and clinical presentations (the associated symptoms of disease); one example being Streptococcus pyogenes - a pathogen of major health concern.
Understanding the unique variation in the Aotearoa population and its health consequences is essential for accurate diagnosis and the effective use of genomics in our own healthcare.
Clinical genomics analysis corrects a decades-long mis-diagnosis
Genomics diagnosis in clinical medicine is well established overseas, but a lack of diagnostic capability and infrastructure in New Zealand is forcing clinicians to purchase sequencing and analysis overseas. The completed Clinical Genomics project contributed to the development of the workforce and skills, which is vital to support genomic diagnostics in healthcare delivery.
The Genomics Aotearoa/NeSI training partnership goes from strength to strength
Genomic Aotearoa’s approach to bioinformatics is one of research and upskilling. The aim is to upskill New Zealand’s biologists to analyse their own data through training opportunities, infrastructure, and building new tools and technologies into projects.
Data sovereignty in action
One of the most important projects Genomics Aotearoa has undertaken is the Aotearoa Genomic Data Repository (AGDR) - a unique online resource that provides a secure place for the Aotearoa research community to store and to share genomic data within a Māori values context, following the principles of Māori Data Sovereignty.
Te Nohonga Kaitiaki guidelines define a framework for engagement
A Genomics Aotearoa project has developed culturally informed ethical guidelines to connect Māori concepts and expectations of kaitiakitanga to the context of genomics. These guidelines incorporate Vision Mātauranga and support greater benefit sharing.
A high-quality Bilberry genome for the benefit of Blueberry growers
A joint team of MBIE Filling the Void and Genomics Aotearoa researchers has sequenced the world's first bilberry genome, which presents opportunities for developing New Zealand's blueberry production.
Are you my father? Population-wide genomics confirms kākāpō paternity
Having a whole genome sequence has opened the possibilities for understanding the health and fertility of kākāpō - one of New Zealand’s most critically-endangered species, and now it’s helped to confirm parentage.
A SING Aotearoa experience - Jordon Lima (Ngāti Porou)
Attending her first SING Aotearoa conference was transformational for Jordon Lima.
Aquatic ecosystem function and diversity along a freshwater-to-marine gradient
Understanding variations in factors such as microbial nutrient uptake, transformation, and photosynthesis is important for managing water resources, as imbalances in both nutrient availability and photosynthesis can lead to poor water quality.
One of the consequences of declining water quality is an increase in cyanobacteria – these are photosynthetic bacteria that live in a wide variety of aquatic or wet habitats.
Genome sequencing of three invasive wasps informs next-generation pest control
Genomic sequencing of three invasive wasps paves the way to better options to control these pests.
Genomic adaptations to a precarious environment - hot spring cosmopolitanism
In Aotearoa, novel species of the bacterial genus Acidithiobacillus are exceptionally prevalent in hot springs, including at temperatures far above those previously known for the genus.
High quality sheep genomes capitalise on existing knowledge
Considerable resources are available on sheep genetics in Aotearoa. How can we refine new genomic technologies and incorporate them into the existing frameworks ?
Metagenomics summer school demystifies data analysis
Metagenomics, the study of genetic material recovered directly from environmental samples, is giving microbial ecologists a much more detailed look at the previously hidden diversity of microscopic life, significantly adding to our understanding of the living world.
Rewarewa is our first native tree with a high quality genome - and Māori honey producers could benefit
The completion of the native rewarewa tree (Knightia excelsa) high quality genome demonstrates how Aotearoa is leading genomics for its native species.
Supernova and ingenuity solve a stick insect problem
NeSI provides Genomics Aotearoa with access to dedicated high-memory compute services. Their combination of bioinformatics expertise and platform resources successfully overcame barriers to a complex stick insect genome assembly.
Syndactyly genomics research offers family some control
The medical term for two or more fingers or toes that are fused together or “webbed” is syndactyly. while common and often mild, rarer, more severe forms of the condition can significantly impair hand and foot function.
Upskilling our clinical workforce
New Zealand is getting prepared for more genetic- and genomic-based health care options.