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Genomics Aotearoa/NeSI training programme

Genomics Aotearoa and NeSI partner to deliver a comprehensive programme of training in bioinformatics.

The programme is free for all participants. Upcoming and past events are posted on our training events page. If you want to know about potential future workshops or would like details of the workshop content, please contact Tyler McInnes at Genomics Aotearoa or Dini Senanayake at NeSI.

GA NeSI workshop programme

Level Workshop (click to visit the repository for the workshop)
Beginner Genomics Data Carpentry
  R for genomics
Beginner-intermediate RNA-Seq data analysis
Intermediate Genotype imputation
  Introduction to Shell scripting & working with the HPC Scheduler
  Introduction to Snakemake
  Reproducible bioinformatics workflows with Nextflow
Intermediate-advanced Intermediate-advanced Shell scripting for bioinformatics
Advanced Scaling-up gene regulatory network simulations
  Genome assembly
  Hi-C (chromosome conformation capture)
  Metagenomics methods & analysis