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Genomics Aotearoa/NeSI training programme

Genomics Aotearoa and REANNZ partner to deliver a comprehensive programme of training in bioinformatics.

The programme is free for all participants. Upcoming and past events are posted on our training events page. If you want to know about potential future workshops or would like details of the workshop content, please contact Chloé Van Der Burg at Genomics Aotearoa.

GA NeSI workshop programme

 

Level

Workshop (click to visit the repository for the workshop)

Beginner

Genomics Data Carpentry

 

R for genomics

  

Beginner-intermediate

RNA-Seq data analysis

 

eDNA

 

Genotyping-by-sequencing

  

Intermediate

Genotype imputation

 

Introduction to Shell scripting & working with the HPC Scheduler

 

Introduction to Snakemake

 

Reproducible bioinformatics workflows with Nextflow

  

Intermediate-advanced

Intermediate-advanced Shell scripting for bioinformatics

  

Advanced

Scaling-up gene regulatory network simulations

 

Genome assembly

 

Hi-C (chromosome conformation capture)

 

Metagenomics methods & analysis